yhcM [2019-03-01 19:42:20]

general stress protein

locus: BSU09140

pI: 9.90

mw: 16.89 kDa

protein length: 151 aa

gene length: 456 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]

Gene

Coordinates: 988,417 988,872

Expression and Regulation

Operons

• genes: [gene|536B5EEE4EEAF2E3789B298B477C710F81C5DA2D|yhcM]
  description: [Pubmed|12480901]

  sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|12480901,15699190], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]
  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|15699190], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]
  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

  regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|15805528]

Biological materials

Mutant

• MGNA-A670 (yhcM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/670 NBRP B. subtilis, Japan]
• BKE09140 ([gene|536B5EEE4EEAF2E3789B298B477C710F81C5DA2D|yhcM]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATCCCTCCTTTGCAGT, downstream forward: _UP4_TAAAAAAACGTGTAATCCTC
• BKK09140 ([gene|536B5EEE4EEAF2E3789B298B477C710F81C5DA2D|yhcM]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATCCCTCCTTTGCAGT, downstream forward: _UP4_TAAAAAAACGTGTAATCCTC

References

• 15805528,12480901,15699190